Proda

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Proda[1] is a Multiple Sequence Alignment tool. It is designed for alignment of sequences with domain shuffling or duplication.

References

  1. Phuong TM, Do CB, Edgar RC, and Batzoglou S. Multiple alignment of protein sequences with repeats and rearrangements. Nucleic Acids Res 2006; 34(20) 5932-42. doi:10.1093/nar/gkl511 pmid:17068081. PubMed HubMed [proda]
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